Wenjie Du
16 papers · 2024–2026 · 7 venues · across top CS/AI venues
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Achievements
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π Interdisciplinary Bridge Β· Silver πΊοΈ Taxonomy Completionist (32) π Conference Polyglot Β· Silver π Keyword Champion (4) π Grand Slam
ποΈ
Keyword Collector
(80)
β‘
Prolific Year Β· Productive
π
Renaissance Researcher
(6)
π
Century Club Β· Bronze
Top co-authors
Research topics
Machine Learning
(13)
Artificial Intelligence
(10)
Deep Learning
(10)
Core Methods
(9)
Learning Types Β· Machine Learning
(7)
Core AI
(6)
Models
(5)
Learning Paradigms
(4)
Healthcare & Medicine
(3)
Natural Language Processing
(3)
Application Areas
(3)
Architectures
(3)
Learning Types Β· Deep Learning
(3)
Data Science & Analytics
(2)
Interdisciplinary
(2)
Keywords
graph neural network
(5)
molecular relational learning
(4)
large language model
(4)
mass spectrometry
(4)
deep learning
(3)
peptide sequencing
(3)
multi-task learning
(2)
molecular graph
(2)
information bottleneck
(2)
few-shot learning
(1)
temporal reasoning
(1)
data augmentation
(1)
question answering
(1)
chain-of-thought reasoning
(1)
neural network training
(1)
feature alignment
(1)
knowledge distillation
(1)
attention mechanism
(1)
medical image segmentation
(1)
unsupervised domain adaptation
(1)
Papers
Interleaved Tool-Call Reasoning for Protein Function Understanding
ACL 2026
MSAnchor: De Novo Molecular Generation from Mass Spectrometry Data with Anchor-Extended Molecular Scaffolds
AAAI 2026
SHAPE: Structure-aware Hierarchical Unsupervised Domain Adaptation with Plausibility Evaluation for Medical Image Segmentation
CVPR 2026
Deep Learning for Multivariate Time Series Imputation: A Survey
IJCAI 2025
DO-CoLM: Dynamic 3D Conformation Relationships Capture with Self-Adaptive Ordering Molecular Relational Modeling in Language Models
IJCAI 2025
Electron Density-enhanced Molecular Geometry Learning
IJCAI 2025
Enhancing Graph Invariant Learning from a Negative Inference Perspective
ICML 2025
Iterative Substructure Extraction for Molecular Relational Learning with Interactive Graph Information Bottleneck
ICLR 2025
MTGIB-UNet: A Multi-Task Graph Information Bottleneck and Uncertainty Weighted Network for ADMET Prediction
IJCAI 2025
ReNovo: Retrieval-Based \emph{De Novo} Mass Spectrometry Peptide Sequencing
ICLR 2025
Time-MQA: Time Series Multi-Task Question Answering with Context Enhancement
ACL 2025
AdaNovo: Towards Robust \emph{De Novo} Peptide Sequencing in Proteomics against Data Biases
NeurIPS 2024
FlexMol: A Flexible Toolkit for Benchmarking Molecular Relational Learning
NeurIPS 2024
MMGNN: A Molecular Merged Graph Neural Network for Explainable Solvation Free Energy Prediction
IJCAI 2024
MolTC: Towards Molecular Relational Modeling In Language Models
ACL 2024
NovoBench: Benchmarking Deep Learning-based \emph{De Novo} Sequencing Methods in Proteomics
NeurIPS 2024