Dongyu Xue

8 papers · 2023–2025 · 3 venues · across top CS/AI venues

Authors are matched by name, so researchers who share a name ("Yang Liu", "Wei Wang") appear as a single profile and their paper counts, venues and achievements are combined. How identity is handled.

Achievements

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🌍 Conference Polyglot · Bronze 🌉 Interdisciplinary Bridge · Bronze 🗺️ Taxonomy Completionist (11) 🐣 Hot Topic Early Bird ⚡ Prolific Year · Productive

Venues

ICML (5) ICLR (2) NeurIPS (1)

Top co-authors

Quanquan Gu (8) Zaixiang Zheng (8) Fei Ye (5) Xinyou Wang (4) Xiangxin Zhou (4) Shujian Huang (3) Ruizhe Chen (2) Yi Zhou (1) Xiangxiang Zeng (1) Lihao Wang (1)

Research topics

Deep Learning (5) Models (5) Artificial Intelligence (4) Machine Learning (4) Core AI (4) Core Methods (2) Healthcare & Medicine (1) Natural Language Processing (1) Application Areas (1) Learning Types (1) Optimization & Theory (1) Research (1) Resources & Methods (1)

Keywords

diffusion model (2) inverse folding (2) protein design (2) protein structure (2) protein structure prediction (1) protein folding (1) benchmark evaluation (1) molecular design (1) conditional generation (1) protein language model (1) antibody design (1) sequence recovery (1) amino acid sequence (1) conformational dynamics (1) secondary structure (1) generative model (1) multimodal learning (1) representation learning (1) structural adapter (1) generative modeling (1)

Papers

An All-Atom Generative Model for Designing Protein Complexes ICML 2025 Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling ICML 2025 DPLM-2: A Multimodal Diffusion Protein Language Model ICLR 2025 Elucidating the Design Space of Multimodal Protein Language Models ICML 2025 ProteinBench: A Holistic Evaluation of Protein Foundation Models ICLR 2025 Antigen-Specific Antibody Design via Direct Energy-based Preference Optimization NeurIPS 2024 Diffusion Language Models Are Versatile Protein Learners ICML 2024 Structure-informed Language Models Are Protein Designers ICML 2023