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tree topology

8 papers

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Co-occurring keywords · papers mentioning both

variational inference (4) phylogenetic inference (3) markov chain monte carlo (2) bayesian inference (2) long-range dependency (1) regression tree (1) bayesian method (1) bayesian regression tree (1) birth-death process (1) phylogenetic reconstruction (1)

Papers

PhyloVAE: Unsupervised Learning of Phylogenetic Trees via Variational Autoencoders ICLR 2025 MambaTree: Tree Topology is All You Need in State Space Model NeurIPS 2024 PhyloGFN: Phylogenetic inference with generative flow networks ICLR 2024 ARTree: A Deep Autoregressive Model for Phylogenetic Inference NeurIPS 2023 GeoPhy: Differentiable Phylogenetic Inference via Geometric Gradients of Tree Topologies NeurIPS 2023 Reconstructing Ultrametric Trees from Noisy Experiments ALT 2023 VaiPhy: a Variational Inference Based Algorithm for Phylogeny NeurIPS 2022 Continuous-Time Birth-Death MCMC for Bayesian Regression Tree Models JMLR 2020