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gene expression

70 papers

Papers

Advancing Cancer Prognosis with Hierarchical Fusion of Genomic, Proteomic and Pathology Imaging Data from a Systems Biology Perspective CVPR 2026 Auxiliary Gene Learning: Spatial Gene Expression Estimation by Auxiliary Gene Selection AAAI 2026 Bulk RNA-seq Guided Multi-modal Detection of Anomalous Regions in Human Cancer via Spatial Transcriptomics CVPR 2026 Cross-Slice Knowledge Transfer via Masked Multi-Modal Heterogeneous Graph Contrastive Learning for Spatial Gene Expression Inference CVPR 2026 Departures: Distributional Transport for Single-Cell Perturbation Prediction with Neural Schrödinger Bridges AAAI 2026 GATCL: An Adaptive Contrastive Learning Framework Based on MHGAT for Spatial Domain Identification in Spatial Transcriptomics AAAI 2026 Gene Incremental Learning for Single-Cell Transcriptomics AAAI 2026 HyperST: Hierarchical Hyperbolic Learning for Spatial Transcriptomics Prediction CVPR 2026 Multi-View Hierarchical Alignment Learning for Spatial Transcriptomics CVPR 2026 Refinement Contrastive Learning of Cell–Gene Associations for Unsupervised Cell Type Identification AAAI 2026 When Genes Speak: A Semantic-Guided Framework for Spatially Resolved Transcriptomics Data Clustering AAAI 2026 Can interpretability and accuracy coexist in cancer survival analysis? MLHC 2025 Conditional Causal Representation Learning for Heterogeneous Single-cell RNA Data Integration and Prediction IJCAI 2025 Cross-Modal Imputation and Uncertainty Estimation for Spatial Transcriptomics AISTATS 2025 Diffusion Generative Modeling for Spatially Resolved Gene Expression Inference from Histology Images ICLR 2025 DUSTED: Dual-Attention Enhanced Spatial Transcriptomics Denoiser AAAI 2025 Identifying Causal Mechanism Shifts Under Additive Models with Arbitrary Noise IJCAI 2025 Multi-Modal and Multi-Attribute Generation of Single Cells with CFGen ICLR 2025 Spatially Resolved Transcriptomics Data Clustering with Tailored Spatial-scale Modulation IJCAI 2025 STINR: Deciphering Spatial Transcriptomics via Implicit Neural Representation CVPR 2025 A benchmark for prediction of transcriptomic responses to chemical perturbations across cell types NeurIPS 2024 Cell2Sentence: Teaching Large Language Models the Language of Biology ICML 2024 Cell ontology guided transcriptome foundation model NeurIPS 2024 Designing Cell-Type-Specific Promoter Sequences Using Conservative Model-Based Optimization NeurIPS 2024 Gene-Gene Relationship Modeling Based on Genetic Evidence for Single-Cell RNA-Seq Data Imputation NeurIPS 2024