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biomedical entity linking

21 papers

BIOEL BEL

Papers

Accelerating Cross-Encoders in Biomedical Entity Linking ACL 2025 Guiding Large Language Models for Biomedical Entity Linking via Restrictive and Contrastive Decoding EMNLP 2025 Learning from Negative Samples in Biomedical Generative Entity Linking ACL 2025 Biomedical Entity Linking as Multiple Choice Question Answering COLING 2024 Biomedical Entity Linking for Dutch: Fine-tuning a Self-alignment BERT Model on an Automatically Generated Wikipedia Corpus COLING 2024 Efficient Biomedical Entity Linking: Clinical Text Standardization with Low-Resource Techniques ACL 2024 Leveraging Wikidata for Biomedical Entity Linking in a Low-Resource Setting: A Case Study for German NAACL 2024 A Comprehensive Evaluation of Biomedical Entity Linking Models EMNLP 2023 BioFEG: Generate Latent Features for Biomedical Entity Linking EMNLP 2023 Exploring Partial Knowledge Base Inference in Biomedical Entity Linking ACL 2023 GraphPrompt: Graph-Based Prompt Templates for Biomedical Synonym Prediction AAAI 2023 Improving Biomedical Entity Linking with Cross-Entity Interaction AAAI 2023 Generative Biomedical Entity Linking via Knowledge Base-Guided Pre-training and Synonyms-Aware Fine-tuning NAACL 2022 A Lightweight Neural Model for Biomedical Entity Linking AAAI 2021 BERT might be Overkill: A Tiny but Effective Biomedical Entity Linker based on Residual Convolutional Neural Networks EMNLP 2021 Clustering-based Inference for Biomedical Entity Linking NAACL 2021 Fast and Effective Biomedical Entity Linking Using a Dual Encoder EACL 2021 Learning Domain-Specialised Representations for Cross-Lingual Biomedical Entity Linking ACL 2021 BENNERD: A Neural Named Entity Linking System for COVID-19 EMNLP 2020 Fair Evaluation in Concept Normalization: a Large-scale Comparative Analysis for BERT-based Models COLING 2020 LATTE: Latent Type Modeling for Biomedical Entity Linking AAAI 2020