Medical NLP

Using Snomed to recognize and index chemical and drug mentions. EMNLP 2019 VSP at PharmaCoNER 2019: Recognition of Pharmacological Substances, Compounds and Proteins with Recurrent Neural Networks in Spanish Clinical Cases EMNLP 2019 A Corpus with Multi-Level Annotations of Patients, Interventions and Outcomes to Support Language Processing for Medical Literature ACL 2018 A Neural Autoencoder Approach for Document Ranking and Query Refinement in Pharmacogenomic Information Retrieval ACL 2018 AttentionMeSH: Simple, Effective and Interpretable Automatic MeSH Indexer EMNLP 2018 Biomedical Event Extraction Using Convolutional Neural Networks and Dependency Parsing ACL 2018 Comparing CNN and LSTM character-level embeddings in BiLSTM-CRF models for chemical and disease named entity recognition EMNLP 2018 Convolutional neural networks for chemical-disease relation extraction are improved with character-based word embeddings ACL 2018 CRF-LSTM Text Mining Method Unveiling the Pharmacological Mechanism of Off-target Side Effect of Anti-Multiple Myeloma Drugs ACL 2018 De-identifying Free Text of Japanese Dummy Electronic Health Records EMNLP 2018 Domain Adaptation for Disease Phrase Matching with Adversarial Networks ACL 2018 Embedding Transfer for Low-Resource Medical Named Entity Recognition: A Case Study on Patient Mobility ACL 2018 Findings of the WMT 2018 Biomedical Translation Shared Task: Evaluation on Medline test sets EMNLP 2018 Identifying Key Sentences for Precision Oncology Using Semi-Supervised Learning ACL 2018 Identifying Risk Factors For Heart Disease in Electronic Medical Records: A Deep Learning Approach ACL 2018 Investigating Domain-Specific Information for Neural Coreference Resolution on Biomedical Texts ACL 2018 Keyphrases Extraction from User-Generated Contents in Healthcare Domain Using Long Short-Term Memory Networks ACL 2018 On Learning Better Embeddings from Chinese Clinical Records: Study on Combining In-Domain and Out-Domain Data ACL 2018 Phrase2VecGLM: Neural generalized language model–based semantic tagging for complex query reformulation in medical IR ACL 2018 PICO Element Detection in Medical Text via Long Short-Term Memory Neural Networks ACL 2018 Prediction Models for Risk of Type-2 Diabetes Using Health Claims ACL 2018 Semantic role labeling tools for biomedical question answering: a study of selected tools on the BioASQ datasets EMNLP 2018 Structured Multi-Label Biomedical Text Tagging via Attentive Neural Tree Decoding EMNLP 2018 Toward Cross-Domain Engagement Analysis in Medical Notes ACL 2018