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binding site prediction

6 papers

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Co-occurring keywords · papers mentioning both

graph neural network (3) protein structure (2) protein language model (2) drug discovery (2) contrastive learning (2) virtual screening (1) transformer block (1) multi-scale representation (1) 3d u-net (1) explainable deep learning (1)

Papers

S²Drug: Bridging Protein Sequence and 3D Structure in Contrastive Representation Learning for Virtual Screening AAAI 2026 Accurate Nucleic Acid-Binding Residue Identification Based Domain-Adaptive Protein Language Model and Explainable Geometric Deep Learning AAAI 2025 AsEP: Benchmarking Deep Learning Methods for Antibody-specific Epitope Prediction NeurIPS 2024 Pre-Training Protein Bi-level Representation Through Span Mask Strategy On 3D Protein Chains ICML 2024 GLPocket: A Multi-Scale Representation Learning Approach for Protein Binding Site Prediction IJCAI 2023 TANKBind: Trigonometry-Aware Neural NetworKs for Drug-Protein Binding Structure Prediction NeurIPS 2022