single-cell rna sequencing

Adaptive Nonparametric Perturbations of Parametric Models with Generalized Bayes JMLR 2026 Cell-Type Prototype-Informed Neural Network for Gene Expression Estimation from Pathology Images CVPR 2026 Hybrid Restricted Master Problem for Boolean Matrix Factorisation AAAI 2026 PanFoMa: A Lightweight Foundation Model and Benchmark for Pan-Cancer AAAI 2026 scCluBench: Comprehensive Benchmarking of Clustering Algorithms for Single-Cell RNA Sequencing AAAI 2026 A Generic Family of Graphical Models: Diversity, Efficiency, and Heterogeneity ICML 2025 Cross-Modal Imputation and Uncertainty Estimation for Spatial Transcriptomics AISTATS 2025 CycSeq: Leveraging Cyclic Data Generation for Accurate Perturbation Prediction in Single-Cell RNA-Seq IJCAI 2025 Enforcing Latent Euclidean Geometry in Single-Cell VAEs for Manifold Interpolation ICML 2025 Geometry-Aware Generative Autoencoders for Warped Riemannian Metric Learning and Generative Modeling on Data Manifolds AISTATS 2025 Global Ground Metric Learning with Applications to scRNA data AISTATS 2025 GRNFormer: A Biologically-Guided Framework for Integrating Gene Regulatory Networks into RNA Foundation Models ACL 2025 Linear System Identification from Snapshot Data by Schrodinger bridge L4DC 2025 Reconstructing Cell Lineage Trees from Phenotypic Features with Metric Learning ICML 2025 Recovering Manifold Structure Using Ollivier Ricci Curvature ICLR 2025 sciLaMA: A Single-Cell Representation Learning Framework to Leverage Prior Knowledge from Large Language Models ICML 2025 scSiameseClu: A Siamese Clustering Framework for Interpreting Single-cell RNA Sequencing Data IJCAI 2025 SpotDiff: Spatial Gene Expression Imputation Diffusion with Single-Cell RNA Sequencing Data Integration AAAI 2025 The Strong Product Model for Network Inference without Independence Assumptions AISTATS 2025 Gene-Gene Relationship Modeling Based on Genetic Evidence for Single-Cell RNA-Seq Data Imputation NeurIPS 2024 Gene Regulatory Network Inference in the Presence of Dropouts: a Causal View ICLR 2024 SCTrans: Multi-scale scRNA-seq Sub-vector Completion Transformer for Gene-selective Cell Type Annotation IJCAI 2024 Unsupervised Gene-Cell Collective Representation Learning with Optimal Transport AAAI 2024 A Heat Diffusion Perspective on Geodesic Preserving Dimensionality Reduction NeurIPS 2023 Bayesian Data Selection JMLR 2023