biomedical text mining

CRAB: A Benchmark for Evaluating Curation of Retrieval-Augmented LLMs in Biomedicine EMNLP 2025 Entangled Relations: Leveraging NLI and Meta-analysis to Enhance Biomedical Relation Extraction NAACL 2025 ExDDI: Explaining Drug-Drug Interaction Predictions with Natural Language AAAI 2025 GLiM: Integrating Graph Transformer and LLM for Document-Level Biomedical Relation Extraction with Incomplete Labeling ACL 2025 PreClinIE: An Annotated Corpus for Information Extraction in Preclinical Studies ACL 2025 Query-driven Document-level Scientific Evidence Extraction from Biomedical Studies ACL 2025 SciClaims: An End-to-End Generative System for Biomedical Claim Analysis EMNLP 2025 Automatic Extraction of Disease Risk Factors from Medical Publications ACL 2024 Beyond Abstracts: A New Dataset, Prompt Design Strategy and Method for Biomedical Synthesis Generation ACL 2024 Biomedical Concept Normalization over Nested Entities with Partial UMLS Terminology in Russian COLING 2024 Bio-RFX: Refining Biomedical Extraction via Advanced Relation Classification and Structural Constraints EMNLP 2024 Data-driven Coreference-based Ontology Building EMNLP 2024 Federated Document-Level Biomedical Relation Extraction with Localized Context Contrast COLING 2024 Improving Pre-trained Language Model Sensitivity via Mask Specific losses: A case study on Biomedical NER NAACL 2024 Knowledge-enhanced Response Generation in Dialogue Systems: Current Advancements and Emerging Horizons COLING 2024 Knowledge Triplets Derivation from Scientific Publications via Dual-Graph Resonance COLING 2024 TLab at #SMM4H 2024: Retrieval-Augmented Generation for ADE Extraction and Normalization ACL 2024 VE-KD: Vocabulary-Expansion Knowledge-Distillation for Training Smaller Domain-Specific Language Models EMNLP 2024 Automated Extraction of Molecular Interactions and Pathway Knowledge using Large Language Model, Galactica: Opportunities and Challenges ACL 2023 BioDEX: Large-Scale Biomedical Adverse Drug Event Extraction for Real-World Pharmacovigilance EMNLP 2023 Biomedical Parallel Sentence Retrieval Using Large Language Models EMNLP 2023 Building a Corpus for Biomedical Relation Extraction of Species Mentions ACL 2023 Descriptive Knowledge Graph in Biomedical Domain EMNLP 2023 Distantly Supervised Document-Level Biomedical Relation Extraction with Neighborhood Knowledge Graphs ACL 2023 Exploring Partial Knowledge Base Inference in Biomedical Entity Linking ACL 2023