conftrace_

single-cell analysis

12 papers

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Co-occurring keywords

variational inference (2069) representation learning (6206) generative model (2892) gene expression (58) chromatin accessibility (2) drug discovery (119) single-cell transcriptomics (8) foundation model (735) feature embedding (312) transfer learning (5449)

Papers

CLM-Access: A Specialized Foundation Model for High-Dimensional Single-Cell ATAC-Seq Analysis AAAI 2026
scRAG: Hybrid Retrieval-Augmented Generation for LLM-based Cross-Tissue Single-Cell Annotation ACL 2025
Cradle-VAE: Enhancing Single-Cell Gene Perturbation Modeling with Counterfactual Reasoning-based Artifact Disentanglement AAAI 2025
Spatial Coordinates as a Cell Language: A Multi-Sentence Framework for Imaging Mass Cytometry Analysis ACL 2025
Learning Cross-Domain Representations for Transferable Drug Perturbations on Single-Cell Transcriptional Responses AAAI 2025
Cell ontology guided transcriptome foundation model NIPS 2024
A versatile informative diffusion model for single-cell ATAC-seq data generation and analysis NIPS 2024
Semi-supervised Knowledge Transfer Across Multi-omic Single-cell Data NIPS 2024
Comprehensive View Embedding Learning for Single-Cell Multimodal Integration AAAI 2024
Unsupervised Deep Embedded Fusion Representation of Single-Cell Transcriptomics AAAI 2023
Variational Mixtures of ODEs for Inferring Cellular Gene Expression Dynamics ICML 2022
Weakly Supervised Learning of Single-Cell Feature Embeddings CVPR 2018