Bioinformatics

3D Cell Oversegmentation Correction via Geo-Wasserstein Divergence WACV 2026 Adapting a Pre-trained Single-Cell Foundation Model to Spatial Gene Expression Generation from Histology Images CVPR 2026 Advancing Cancer Prognosis with Hierarchical Fusion of Genomic, Proteomic and Pathology Imaging Data from a Systems Biology Perspective CVPR 2026 A Sequence-Graph Fusion Framework via BiMamba and Fourier-KAN for Interpretable Drug-Target Affinity Prediction UAI 2026 BioHiCL: Hierarchical Multi-Label Contrastive Learning for Biomedical Retrieval with MeSH Labels ACL 2026 Bulk RNA-seq Guided Multi-modal Detection of Anomalous Regions in Human Cancer via Spatial Transcriptomics CVPR 2026 Cell-Type Prototype-Informed Neural Network for Gene Expression Estimation from Pathology Images CVPR 2026 CryoHype: Reconstructing a thousand cryo-EM structures with transformer-based hypernetworks CVPR 2026 CryoKRAQEN: Kernel-Regularized Annealing for Quantized Embedding Networks in Cryo-EM Heterogeneous Reconstruction CVPR 2026 Cycle-Consistent Multi-Graph Matching for Self-Supervised Annotation of C. Elegans WACV 2026 Deciphering Genotype-Phenotype Mechanisms from High-Content Profiling via Knowledge-Guided Multi-modal Graph Learning CVPR 2026 From Spots to Pixels: Dense Spatial Gene Expression Prediction from Histology Images CVPR 2026 Gardener: An Agentic AI System for Single-Cell RNA Sequence Analysis ACL 2026 HyperST: Hierarchical Hyperbolic Learning for Spatial Transcriptomics Prediction CVPR 2026 Intervention-Aware Multiscale Representation Learning from Imaging Phenomics and Perturbation Transcriptomics CVPR 2026 LiGen: Active Lipid Generation via a Molecular Language Model ACL 2026 MDCS-MoAME: Multi-directional Composite Scanning with Mixture of Attention and Mamba Experts for Cancer Survival Prediction CVPR 2026 MetaBench: A Multi-task Benchmark for Assessing LLMs in Metabolomics ACL 2026 MolMem: Memory-Augmented Agentic Reinforcement Learning for Sample-Efficient Molecular Optimization ACL 2026 Multi-View Hierarchical Alignment Learning for Spatial Transcriptomics CVPR 2026 Predicting Spatial Transcriptomics from Histology Images via High-Order Multi-Cell Interaction Modeling CVPR 2026 RAGPPI: Retrieval-Augmented Generation Benchmark for Protein–Protein Interactions in Drug Discovery EACL 2026 Robust estimation of graphical models with measurement error: False discovery control and sensitivity analysis UAI 2026 3D Denoisers Are Good 2D Teachers: Molecular Pretraining via Denoising and Cross-Modal Distillation AAAI 2025 3DMolFormer: A Dual-channel Framework for Structure-based Drug Discovery ICLR 2025