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Healthcare & Medicine › Research ›

Bioinformatics

644 papers

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Papers

3D Cell Oversegmentation Correction via Geo-Wasserstein Divergence WACV 2026

Cycle-Consistent Multi-Graph Matching for Self-Supervised Annotation of C. Elegans WACV 2026

RAGPPI: Retrieval-Augmented Generation Benchmark for Protein–Protein Interactions in Drug Discovery EACL 2026

LiGen: Active Lipid Generation via a Molecular Language Model ACL 2026

MetaBench: A Multi-task Benchmark for Assessing LLMs in Metabolomics ACL 2026

MolMem: Memory-Augmented Agentic Reinforcement Learning for Sample-Efficient Molecular Optimization ACL 2026

BioHiCL: Hierarchical Multi-Label Contrastive Learning for Biomedical Retrieval with MeSH Labels ACL 2026

Gardener: An Agentic AI System for Single-Cell RNA Sequence Analysis ACL 2026

3D Denoisers Are Good 2D Teachers: Molecular Pretraining via Denoising and Cross-Modal Distillation AAAI 2025

CryoDomain: Sequence-free Protein Domain Identification from Low-resolution Cryo-EM Density Maps AAAI 2025

Improving Cancer Gene Prediction by Enhancing Common Information Between the PPI Network and Gene Functional Association AAAI 2025

HeMeNet: Heterogeneous Multichannel Equivariant Network for Protein Multi-task Learning AAAI 2025

HHAN: Comprehensive Infectious Disease Source Tracing via Heterogeneous Hypergraph Neural Network AAAI 2025

PRAGA: Prototype-aware Graph Adaptive Aggregation for Spatial Multi-modal Omics Analysis AAAI 2025

Whole Genome Transformer for Gene Interaction Effects in Microbiome Habitat Specificity AAAI 2025

Knowledge-Guided Domain Adaptation Model for Transferring Drug Response Prediction from Cell Lines to Patients AAAI 2025

M²N: A Progressive Macro-to-Micro 3D Modeling Scheme for Unveiling Drug-Target Affinity AAAI 2025

GoBERT: Gene Ontology Graph Informed BERT for Universal Gene Function Prediction AAAI 2025

Robust Heterogeneous Graph Classification for Molecular Property Prediction with Information Bottleneck AAAI 2025

A Simple and Comprehensive Benchmark for Single-Cell Transcriptomics AAAI 2025

PScalpel: A Machine Learning-based Guider for Protein Phase-Separating Behaviour Alteration AAAI 2025

PriFold: Biological Priors Improve RNA Secondary Structure Predictions AAAI 2025

Accurate Nucleic Acid-Binding Residue Identification Based Domain-Adaptive Protein Language Model and Explainable Geometric Deep Learning AAAI 2025

SWAMamba: A Sliding Window Attention Mamba Framework for Predicting Translation Elongation Rates AAAI 2025

mRNA2vec: mRNA Embedding with Language Model in the 5'UTR-CDS for mRNA Design AAAI 2025