Bioinformatics

Inference of Sparse Networks with Unobserved Variables. Application to Gene Regulatory Networks AISTATS 2010 Infinite Relational Modeling of Functional Connectivity in Resting State fMRI NeurIPS 2010 Inter-time segment information sharing for non-homogeneous dynamic Bayesian networks NeurIPS 2010 Penalized Principal Component Regression on Graphs for Analysis of Subnetworks NeurIPS 2010 Probabilistic Multi-Task Feature Selection NeurIPS 2010 Sparse Instrumental Variables (SPIV) for Genome-Wide Studies NeurIPS 2010 Variational Inference over Combinatorial Spaces NeurIPS 2010 An Ab-initio tree-based exploration to enhance sampling of low-energy protein conformations RSS 2009 Bayesian estimation of orientation preference maps NeurIPS 2009 Clustering sequence sets for motif discovery NeurIPS 2009 Exploring Functional Connectivities of the Human Brain using Multivariate Information Analysis NeurIPS 2009 Heterogeneous multitask learning with joint sparsity constraints NeurIPS 2009 Hierarchical Mixture of Classification Experts Uncovers Interactions between Brain Regions NeurIPS 2009 Learning Brain Connectivity of Alzheimer's Disease from Neuroimaging Data NeurIPS 2009 A mixture model for the evolution of gene expression in non-homogeneous datasets NeurIPS 2008 An Empirical Analysis of Domain Adaptation Algorithms for Genomic Sequence Analysis NeurIPS 2008 An improved estimator of Variance Explained in the presence of noise NeurIPS 2008 A spatially varying two-sample recombinant coalescent, with applications to HIV escape response NeurIPS 2008 Efficient Inference in Phylogenetic InDel Trees NeurIPS 2008 Incremental Identification of Qualitative Models of Biological Systems using Inductive Logic Programming JMLR 2008 Nonparametric sparse hierarchical models describe V1 fMRI responses to natural images NeurIPS 2008 Predicting the Geometry of Metal Binding Sites from Protein Sequence NeurIPS 2008 Supervised Bipartite Graph Inference NeurIPS 2008 The Infinite Hierarchical Factor Regression Model NeurIPS 2008 Consistent Feature Selection for Pattern Recognition in Polynomial Time JMLR 2007