Bioinformatics

Relational Classification of Biological Cells in Microscopy Images AAAI 2021 Retrieve and Revise: Improving Peptide Identification with Similar Mass Spectra AAAI 2021 RNA Secondary Structure Representation Network for RNA-proteins Binding Prediction AAAI 2021 Text2Mol: Cross-Modal Molecule Retrieval with Natural Language Queries EMNLP 2021 Towered Actor Critic For Handling Multiple Action Types In Reinforcement Learning For Drug Discovery AAAI 2021 Transformer protein language models are unsupervised structure learners ICLR 2021 A Convolutional Auto-Encoder for Haplotype Assembly and Viral Quasispecies Reconstruction NeurIPS 2020 A New Burrows Wheeler Transform Markov Distance AAAI 2020 Automatic Term Name Generation for Gene Ontology: Task and Dataset EMNLP 2020 BayesSuites: An Open Web Framework for Visualization of Massive Bayesian Networks PGM 2020 BENNERD: A Neural Named Entity Linking System for COVID-19 EMNLP 2020 Chemical and Textual Embeddings for Drug Repurposing AAAI 2020 ERLKG: Entity Representation Learning and Knowledge Graph based association analysis of COVID-19 through mining of unstructured biomedical corpora EMNLP 2020 Finding Most Compatible Phylogenetic Trees over Multi-State Characters AAAI 2020 GGPONC: A Corpus of German Medical Text with Rich Metadata Based on Clinical Practice Guidelines EMNLP 2020 Guiding Deep Molecular Optimization with Genetic Exploration NeurIPS 2020 Improved Variational Bayesian Phylogenetic Inference with Normalizing Flows NeurIPS 2020 Improving Molecular Design by Stochastic Iterative Target Augmentation ICML 2020 Learning Informative Representations of Biomedical Relations with Latent Variable Models EMNLP 2020 Learning Mutational Semantics NeurIPS 2020 Learning Nanoscale Motion Patterns of Vesicles in Living Cells CVPR 2020 RetroXpert: Decompose Retrosynthesis Prediction Like A Chemist NeurIPS 2020 A2-Net: Molecular Structure Estimation from Cryo-EM Density Volumes AAAI 2019 A coupled autoencoder approach for multi-modal analysis of cell types NeurIPS 2019 A Fast Machine Learning Workflow for Rapid Phenotype Prediction from Whole Shotgun Metagenomes AAAI 2019