Bioinformatics

Multiple-Scattering Microphysics Tomography CVPR 2017 Predicting Organic Reaction Outcomes with Weisfeiler-Lehman Network NeurIPS 2017 Protein Interface Prediction using Graph Convolutional Networks NeurIPS 2017 Protein contact prediction from amino acid co-evolution using convolutional networks for graph-valued images NeurIPS 2016 Convolutional Networks on Graphs for Learning Molecular Fingerprints NeurIPS 2015 Principal Differences Analysis: Interpretable Characterization of Differences between Distributions NeurIPS 2015 Spectral Learning of Large Structured HMMs for Comparative Epigenomics NeurIPS 2015 Biclustering Using Message Passing NeurIPS 2014 Learning Modular Structures from Network Data and Node Variables ICML 2014 Searching for Higgs Boson Decay Modes with Deep Learning NeurIPS 2014 Stochastic variational inference for hidden Markov models NeurIPS 2014 Convex Relaxations for Permutation Problems NeurIPS 2013 Gauging Association Patterns of Chromosome Territories via Chromatic Median CVPR 2013 Matrix factorization with binary components NeurIPS 2013 On model selection consistency of penalized M-estimators: a geometric theory NeurIPS 2013 Deep Spatio-Temporal Architectures and Learning for Protein Structure Prediction NeurIPS 2012 Learning Invariant Representations of Molecules for Atomization Energy Prediction NeurIPS 2012 Multiple Choice Learning: Learning to Produce Multiple Structured Outputs NeurIPS 2012 Scalable imputation of genetic data with a discrete fragmentation-coagulation process NeurIPS 2012 Structured Learning of Gaussian Graphical Models NeurIPS 2012 Topology Constraints in Graphical Models NeurIPS 2012 Inferring Interaction Networks using the IBP applied to microRNA Target Prediction NeurIPS 2011 Modelling Genetic Variations using Fragmentation-Coagulation Processes NeurIPS 2011 A highly efficient blocked Gibbs sampler reconstruction of multidimensional NMR spectra AISTATS 2010 Inter-time segment information sharing for non-homogeneous dynamic Bayesian networks NeurIPS 2010