biomedical language model

Choose Your Words Wisely: Domain-adaptive Masking Makes Language Models Learn Faster NAACL 2025 DKITNLP at ArchEHR-QA 2025: A Retrieval Augmented LLM Pipeline for Evidence-Based Patient Question Answering ACL 2025 BioMistral: A Collection of Open-Source Pretrained Large Language Models for Medical Domains ACL 2024 CaresAI at SemEval-2024 Task 2: Improving Natural Language Inference in Clinical Trial Data using Model Ensemble and Data Explanation SemEval 2024 MediSwift: Efficient Sparse Pre-trained Biomedical Language Models ACL 2024 MMSite: A Multi-modal Framework for the Identification of Active Sites in Proteins NeurIPS 2024 Pre-training data selection for biomedical domain adaptation using journal impact metrics ACL 2024 Prompt-based Generation of Natural Language Explanations of Synthetic Lethality for Cancer Drug Discovery COLING 2024 VE-KD: Vocabulary-Expansion Knowledge-Distillation for Training Smaller Domain-Specific Language Models EMNLP 2024 AliBERT: A Pre-trained Language Model for French Biomedical Text ACL 2023 Biomedical Language Models are Robust to Sub-optimal Tokenization ACL 2023 BIOptimus: Pre-training an Optimal Biomedical Language Model with Curriculum Learning for Named Entity Recognition ACL 2023 Detecting Idiomatic Multiword Expressions in Clinical Terminology using Definition-Based Representation Learning EACL 2023 ELiRF-VRAIN at BioNLP Task 1B: Radiology Report Summarization ACL 2023 FII SMART at SemEval 2023 Task7: Multi-evidence Natural Language Inference for Clinical Trial Data SemEval 2023 BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model ACL 2022 CAISA@SMM4H’22: Robust Cross-Lingual Detection of Disease Mentions on Social Media with Adversarial Methods COLING 2022 Literature-Augmented Clinical Outcome Prediction NAACL 2022 Position-based Prompting for Health Outcome Generation ACL 2022 Pretrained Biomedical Language Models for Clinical NLP in Spanish ACL 2022 Self-Supervised Intermediate Fine-Tuning of Biomedical Language Models for Interpreting Patient Case Descriptions COLING 2022 Are we there yet? Exploring clinical domain knowledge of BERT models NAACL 2021 BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA NAACL 2021 Improving Biomedical Pretrained Language Models with Knowledge NAACL 2021 Parameter-Efficient Domain Knowledge Integration from Multiple Sources for Biomedical Pre-trained Language Models EMNLP 2021