Bioinformatics

Generalized Cell Type Annotation and Discovery for Single-Cell RNA-Seq Data AAAI 2023 Generating Novel, Designable, and Diverse Protein Structures by Equivariantly Diffusing Oriented Residue Clouds ICML 2023 Generative Decoding of Visual Stimuli ICML 2023 GNAT: A General Narrative Alignment Tool EMNLP 2023 Good Data, Large Data, or No Data? Comparing Three Approaches in Developing Research Aspect Classifiers for Biomedical Papers ACL 2023 GRASMOS: Graph Signage Model Selection for Gene Regulatory Networks AAAI 2023 Importance Weighted Expectation-Maximization for Protein Sequence Design ICML 2023 Inferring Patient Zero on Temporal Networks via Graph Neural Networks AAAI 2023 Interpretable Chirality-Aware Graph Neural Network for Quantitative Structure Activity Relationship Modeling in Drug Discovery AAAI 2023 Into the Single Cell Multiverse: an End-to-End Dataset for Procedural Knowledge Extraction in Biomedical Texts NeurIPS 2023 Is the ranking of PubMed similar articles good enough? An evaluation of text similarity methods for three datasets ACL 2023 KBioXLM: A Knowledge-anchored Biomedical Multilingual Pretrained Language Model EMNLP 2023 Kernel Sufficient Dimension Reduction and Variable Selection for Compositional Data via Amalgamation ICML 2023 Learning Subpocket Prototypes for Generalizable Structure-based Drug Design ICML 2023 Learning to Describe for Predicting Zero-shot Drug-Drug Interactions EMNLP 2023 Metagenomic Binning using Connectivity-constrained Variational Autoencoders ICML 2023 Modelling Cellular Perturbations with the Sparse Additive Mechanism Shift Variational Autoencoder NeurIPS 2023 MolHF: A Hierarchical Normalizing Flow for Molecular Graph Generation IJCAI 2023 Multiple sequence alignment as a sequence-to-sequence learning problem ICLR 2023 Multi-source Learning via Completion of Block-wise Overlapping Noisy Matrices JMLR 2023 NCUEE-NLP at BioLaySumm Task 2: Readability-Controlled Summarization of Biomedical Articles Using the PRIMERA Models ACL 2023 On Pre-training Language Model for Antibody ICLR 2023 Overview of the BioLaySumm 2023 Shared Task on Lay Summarization of Biomedical Research Articles ACL 2023 PointListNet: Deep Learning on 3D Point Lists CVPR 2023 Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model NeurIPS 2023