Bioinformatics

An Empirical Study of Multi-Task Learning on BERT for Biomedical Text Mining ACL 2020 Automatic Term Name Generation for Gene Ontology: Task and Dataset EMNLP 2020 BayesSuites: An Open Web Framework for Visualization of Massive Bayesian Networks PGM 2020 Benchmark and Best Practices for Biomedical Knowledge Graph Embeddings ACL 2020 BENNERD: A Neural Named Entity Linking System for COVID-19 EMNLP 2020 BERTChem-DDI : Improved Drug-Drug Interaction Prediction from text using Chemical Structure Information AACL 2020 BioMegatron: Larger Biomedical Domain Language Model EMNLP 2020 CASTER: Predicting Drug Interactions with Chemical Substructure Representation AAAI 2020 Chemical and Textual Embeddings for Drug Repurposing AAAI 2020 Chemically Interpretable Graph Interaction Network for Prediction of Pharmacokinetic Properties of Drug-Like Molecules AAAI 2020 CODA-19: Using a Non-Expert Crowd to Annotate Research Aspects on 10,000+ Abstracts in the COVID-19 Open Research Dataset ACL 2020 Communicative Representation Learning on Attributed Molecular Graphs IJCAI 2020 Constrained Dynamic Programming and Supervised Penalty Learning Algorithms for Peak Detection in Genomic Data JMLR 2020 CORD-19: The COVID-19 Open Research Dataset ACL 2020 COVID-19 Literature Topic-Based Search via Hierarchical NMF EMNLP 2020 Deep Hurdle Networks for Zero-Inflated Multi-Target Regression: Application to Multiple Species Abundance Estimation IJCAI 2020 Deep Molecular Programming: A Natural Implementation of Binary-Weight ReLU Neural Networks ICML 2020 DeepVar: An End-to-End Deep Learning Approach for Genomic Variant Recognition in Biomedical Literature AAAI 2020 Developing a Curated Topic Model for COVID-19 Medical Research Literature EMNLP 2020 Domain Adaptation and Instance Selection for Disease Syndrome Classification over Veterinary Clinical Notes ACL 2020 EC-GAN: Inferring Brain Effective Connectivity via Generative Adversarial Networks AAAI 2020 ERLKG: Entity Representation Learning and Knowledge Graph based association analysis of COVID-19 through mining of unstructured biomedical corpora EMNLP 2020 exBERT: Extending Pre-trained Models with Domain-specific Vocabulary Under Constrained Training Resources EMNLP 2020 Fancy Man Launches Zippo at WNUT 2020 Shared Task-1: A Bert Case Model for Wet Lab Entity Extraction EMNLP 2020 Finer Metagenomic Reconstruction via Biodiversity Optimization NeurIPS 2020