protein language model

ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts ICML 2023 Structure-informed Language Models Are Protein Designers ICML 2023 Contact-Distil: Boosting Low Homologous Protein Contact Map Prediction by Self-Supervised Distillation AAAI 2022 Exploring evolution-aware & -free protein language models as protein function predictors NeurIPS 2022 OntoProtein: Protein Pretraining With Gene Ontology Embedding ICLR 2022 PEER: A Comprehensive and Multi-Task Benchmark for Protein Sequence Understanding NeurIPS 2022 Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval ICML 2022 BERTology Meets Biology: Interpreting Attention in Protein Language Models ICLR 2021 Language models enable zero-shot prediction of the effects of mutations on protein function NeurIPS 2021 MSA Transformer ICML 2021 PSSM-Distil: Protein Secondary Structure Prediction (PSSP) on Low-Quality PSSM by Knowledge Distillation with Contrastive Learning AAAI 2021 Transformer protein language models are unsupervised structure learners ICLR 2021